First map of immune system connections reveals new therapeutic opportunities

Sanger researchers have created the first full connectivity map of the human immune system, showing how immune cells communicate with each other and ways to modulate these pathways in disease.

Scanning electron micrograph of a human T lymphocyte (also called a T cell) from the immune system of a healthy donor. Image credit: NIAID.

A first-of-its-kind comprehensive map of the network of connections that make up the human immune system has been created, which could lead to new immunotherapies to treat cancer, infectious diseases, and other conditions where immune responses play a role.

In creating the immune system map, scientists from the Wellcome Sanger Institute, ETH Zürich and collaborators show how immune cells across the body link up and communicate.

This research, published in Nature, includes the discovery of many previously unknown interactions that together shed light on the organisation of the body’s immune defences. This offers answers to longstanding questions about current immunotherapies that are already used to treat patients. In the future, this public and detailed immune system map could also be vital in identifying new therapies.

The immune system comprises specialised cells, some of which individually travel through the body to scan for signs of injury or disease. Once these cells detect a threat, they need to communicate the message to other cells in order to mount an effective immune response. One way this cell-to-cell signalling is done is through proteins on the surfaces of cells that bind on to matching ‘receptor’ proteins on the surfaces of other cells. Previously, scientists and clinicians only had an incomplete map of these receptor connections between all of the different types of immune cells in the body.

An in-depth understanding of the interactions between immune cells, and how this communication fits into the human body as a whole, is vital if we develop treatments that enhance the immune system to fight disease, known as immunotherapies.

Immunotherapies have already demonstrated great potential in treating disease, most notably with certain cancers. However, these only work well in certain groups of patients and for particular conditions. Knowing the map of immune receptor connections could help explain why immunotherapies sometimes only work in a subset of patients, and offer new targets for designing future immunotherapies that may work for patients who currently do not benefit from these cutting-edge treatments.

It is also necessary to understand the cell-to-cell signals happening in the immune system if we hope to prevent and treat autoimmune diseases, which are caused when the body mistakes internal signals and attacks itself.

This new publication, from the Wellcome Sanger Institute and collaborators, details how researchers isolated and investigated a near-complete set of the surface proteins that physically link immune cells together. They then used a large amount of computational and mathematical analysis to create a map showing the cell types, messengers, and relative speed of each conversation taking place between immune cells.

Creating this detailed map of the immune system has required years of technological advances to tackle a problem of this scale. Each immune cell may have hundreds of distinct surface proteins and receptors on it, and the interactions involving these proteins are often so transient that specialised methods had to be invented to make assembling an accurate map possible.

With this map, it is possible to see the impact of different diseases on the immune system as a whole, and investigate new therapies that bind to different proteins on the immune cell surface. Cell surface proteins serve as the basis for new medicines more often than any other protein type, due to their accessibility to drugs and powerful influence on the cell's signals.

Source: Sanger Institute